CDS

Accession Number TCMCG081C09913
gbkey CDS
Protein Id XP_010651353.1
Location join(1026209..1026514,1026946..1027071,1027208..1027247,1027351..1027433,1028866..1028943,1029055..1029108,1029305..1029433,1029602..1031446)
Gene LOC100246694
GeneID 100246694
Organism Vitis vinifera

Protein

Length 886aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010653051.2
Definition PREDICTED: extensin isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category A
Description K homology RNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13095        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGACGAAGGTTGACCAGGCATCTGCTGTTGAATCTCGGCGTGCTCAGATGACTGGAACGAGTACTTCGCCTGCTGCAACTACTAGTAGTTCAAGGATCTCCATGTTTGGAGCAAAGTCTGGGTTTGTTATCCCGAAAAATAAATTATCAGGCTCTATGGTTCCCATCTTCCGGGCTGGTAAAAAATTGGGAAGTAGTGATGGGGCAAATGAAGAAAGTACCAAAACGGTGCAGAGAAAAACTAAATGGGGCCCTGATCTGACACAGGATGCTGCTGTCAGAAGAGGAACAGCTTTAGCTTTTCAGACTCGGGTGGATCAAATTACACTACAGCTAAAATCAGGAGTACTGGAGATTGGCGACAATCAAGATTCATCATTGGTAGCCCAGGTTCCTGATCAGGAGTTTCCCAGCCATCAGAATAACAGTGAGAAGTCAGAACTGTTGGAACTTGAAAGACGGGAAGCTATTGGTGAGATGTTGAAGTTAAATCCAAGTTACAAAGCCCCACCGGATTATAAACCATTGTTGAAAGAGGCCAGAGTTCCTATCCCTGTGAAAGAATATCCTGGGTACAATTTCATTGGCTTAATATTTGGGCCTGGGAGTGATACTCTAAAGCGTCTAGAAAAGGAAACTGGAGCCAAGGTACAAGTATATGGTAACAAAGCGGATACAGGACAGAAGGTTGAAATTACTCCATCTGATGGAATCCAGGGTGCTCATGAAGAATTATATCTTCATATATCAGCCGAGACATTTGAGAAAGTTGATGCTGCAGTCGCGCTGATTGAATTGCTAGTCACTCCAGTTTCAGGAAATCCAGCTGCTGTTTCCACCACACCAACTTCAGTTTCTGGGGATAATGTGAATGTTCATAATCAAAGCCAGGAAGTGGTCCCTACTACTGTGGTAAACCCAGGAGTGGTGCAACCAGTGTCAGGTCCTTCACAAACTCCTCCACAAGGTCAGTTTCAATACCCTGGACCATGGTTTCCCATTGGCCCTCCTCCCATTCCAATGCACCTGCCTTCTGGCTTCATTCCCCCATCGAATCCTTCAGCACAAATTCTCAACAATCCTCCTCATCTACCATCACCGTCTTTCAGTGCTTCAAACATGCCTTCATTGTTTGGGCCTCGGCCATCACCAGCAGCTGGATTTGGCTCAGTACTCCGAAACCCATCTCCTGTTCCCCTCAGGCCACAGTCATCAATTCAGATGCTGCAGCGGCCATACATGCCTCAGGCAAATCTGCCAATGTTGGCTCAGCACCCATTATTGGCTCAACCTAATGTTTCAGCTCCTCTTCCATTTCCTGTCAACCAAGCCACACCTCTGGGACCACCAACAACTGGAAGGCCTTCAATGCCTTTGTTGCCTCAATCTGTACCAAACCTTCTTTCAGGACCACTACCGGACCGGCCCATAACCCCTGCTGGGAGCTCTACTGGATGGCCCAGAGTGCCATTAGGCACTCCAGCATCCCTAGGCCCAAACCAAATGGTGCAGATGACCACATCAATGGTTCCTGGAGTTCCACGGCCTGTTGTAGCATCTGTAGCACCACCATCAAATATCTCAGCAGCCAATATGGTATCACCTGTAACCTTTTCATCCCGGCCATCTGCTCCCCAATTACCCAGCACACAGCAGAACCGTCCCCTTACACCCCCAACCTTTGCTTCTGTTCCACCACCTCAGATGGGGCCCTCCCCTACAACTCCAGTTTCTCTCCCTCCAGCACCTGTACCTCCACAAATGCAACCATTAACTACACCGGCACCAATTCCTAACCCATCCCCAAGGCCTGTATTGGGGTCCACTCCAGTTCCTTCATCAATGCAATCATCTACACCCCCAACACCTCTGCAGTTTGGGATTCCAAGTTCCGTTTCTGGAGGTATCCCTAGCTTCACTTCTGTAAGGCCTCCTGTAGCAACTCTGATACCACAAAGGCCAAGTTCCAGTGATTTCACTTTTCAGCCTCATCAGCCACTTAATGCAGTCTCCCAGGCTGTTCCCATGCCTAGCGGTCAACCTACAACTCAGAATCCTCTGCCCCCTAAACCAATTATGCAACCTCCTATGGCACCGCAACCGCCATCTTTCAGGGTGGCCATGCACAATTCAACTCCCCCAGCCACCATGCCCCCGTTTCTGAGGCCACAGGTTAACAATCAGATGGGTCCACCTCATTCTCAAATATCTGCTGCATCCTTTCCTGGAACGCCATCTTCCTTGTCTCCCATGTCAGCTCCTCTCAGACCCCCAGCATTTCAAAGTCCAAGTTCTGTTGCAGCTGCAATTCCAGTCCCACAAAGGGGACCAGGGAACTTCAACCCAGTTCGCCAAATCTCCAATTTGCCTGGTCCTTTCCCTTCCAGATCAGGAAATGCTATGCAACTCCAGCAGAACTTTCCAGCTCCACCAGCTCGGCCAGGAAACCCATCAGCCCCAAATCAGCACTTTGGCAACATGTCCTTTGCTTCTCCTAAACCAGCCTCTGGCCCTCATGGAGCACCGCAAATATATGATCCATTCTCCCCGACTTCTGTGCCTCGTGCACCTCCGCAGCAGGGAGGTAATCCAGCAAAGCTGAGAAAACAGGAGAATGACCCAGAGTACGAGGACTTGATGGCCTCTGTTGGAGTAAAATAA
Protein:  
MTKVDQASAVESRRAQMTGTSTSPAATTSSSRISMFGAKSGFVIPKNKLSGSMVPIFRAGKKLGSSDGANEESTKTVQRKTKWGPDLTQDAAVRRGTALAFQTRVDQITLQLKSGVLEIGDNQDSSLVAQVPDQEFPSHQNNSEKSELLELERREAIGEMLKLNPSYKAPPDYKPLLKEARVPIPVKEYPGYNFIGLIFGPGSDTLKRLEKETGAKVQVYGNKADTGQKVEITPSDGIQGAHEELYLHISAETFEKVDAAVALIELLVTPVSGNPAAVSTTPTSVSGDNVNVHNQSQEVVPTTVVNPGVVQPVSGPSQTPPQGQFQYPGPWFPIGPPPIPMHLPSGFIPPSNPSAQILNNPPHLPSPSFSASNMPSLFGPRPSPAAGFGSVLRNPSPVPLRPQSSIQMLQRPYMPQANLPMLAQHPLLAQPNVSAPLPFPVNQATPLGPPTTGRPSMPLLPQSVPNLLSGPLPDRPITPAGSSTGWPRVPLGTPASLGPNQMVQMTTSMVPGVPRPVVASVAPPSNISAANMVSPVTFSSRPSAPQLPSTQQNRPLTPPTFASVPPPQMGPSPTTPVSLPPAPVPPQMQPLTTPAPIPNPSPRPVLGSTPVPSSMQSSTPPTPLQFGIPSSVSGGIPSFTSVRPPVATLIPQRPSSSDFTFQPHQPLNAVSQAVPMPSGQPTTQNPLPPKPIMQPPMAPQPPSFRVAMHNSTPPATMPPFLRPQVNNQMGPPHSQISAASFPGTPSSLSPMSAPLRPPAFQSPSSVAAAIPVPQRGPGNFNPVRQISNLPGPFPSRSGNAMQLQQNFPAPPARPGNPSAPNQHFGNMSFASPKPASGPHGAPQIYDPFSPTSVPRAPPQQGGNPAKLRKQENDPEYEDLMASVGVK